Table 1 BUSCOs and CEGMAs indicated ratios of benchmarking genes in 2 pipelines were correctly assembled in CRI12 genome. The ratios could represent completeness of assembled genome. Repeat ratio indicated ratio of repeat sequence in CRI12 genome
From: Cotton pedigree genome reveals restriction of cultivar-driven strategy in cotton breeding
Category | CRI12 genome |
|---|---|
Genome size | 2239Â Mb |
Contigs | 974 |
ContigN50 | 11.2Â Mb |
Scaffolds | 270 |
ScaffoldN50 | 91Â Mb |
GC content | 34.16% |
Gene numbers | 72,262 |
BUSCOs | 96.10% |
CEGMAs | 95.56% |
Repeat ratio | 62.75% |