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Fig. 6 | Genome Biology

Fig. 6

From: Haplotype-resolved assemblies and variant benchmark of a Chinese Quartet

Fig. 6

Quality of Chinese Quartet assemblies and accuracy of variant calling at different HiFi sequencing depths. a Contig N50 (left), completeness (middle), and QV (right) for paternal and maternal haplotypes across 10 × to 100 × HiFi sequencing depths. Completeness and QV are calculated by BUCSO and Merqury, respectively. b Recall, precision, and F1-score for SNVs, indels, large deletions, and insertions using assemblies with diverse HiFi sequencing depths (ranging from 10 × to 100 ×)

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