Fig. 2
From: Fake IDs? Widespread misannotation of DNA transposons as a general transcription factor
Frequency and types of TEs found in overlapping events with predicted protein-coding regions (CDS) of genome assemblies. A Number of intersections of TEs with predicted protein-coding regions (CDS) of genome assemblies of various vertebrates. Only TEs with 100% sequence overlap with protein-coding regions are shown. The predominant type of TE found for each species is shown. Species with (*) show unusually high levels of overlapping events. B, C Class 1 TEs are shown in green, and class 2 are shown in navy. B Types of TEs found in Danio rerio (zebrafish) and C types of TEs found in Xenopus tropicalis (western clawed frog). Other class 1 and 2 elements for B include Crypton, Harbinger, I, Ngaro, and Proto1. Other class 2 for C include piggyBac and Polinton. D Illustrating a sample of TEs overlapping with predicted protein-coding regions (CDS) from various vertebrates. The approximate length and relative location of the protein-coding regions are shown in dark navy, untranslated regions in light navy and TEs are in green