From: Performance of computational algorithms to deconvolve heterogeneous bulk ovarian tumor tissue depends on experimental factors
Method
Implemented by
Uses scRNA-seq data
Availability
BayesPrism
Chu et al. 2022 [11]
Yes
R package
Bisque
Jew et al. 2020 [12]
CIBERSORTx
Newman et al. 2019 [13]
Web app
EPIC
Racle et al. 2017 [14]
No
MuSiC
Wang et al. 2019 [15]
NNLS
Mullen and van Stokkum 2012 [59]