From: Ariadne: synthetic long read deconvolution using assembly graphs
Dataset | Species | Deconv. Method | Difference in NA50 (bp) | Reference size (bp) |
---|---|---|---|---|
MOCK5 10x | Enterobacter cloacae* | Ariadne | 16 655 | 5 598 796 |
MOCK20 TELL-Seq | Streptococcus agalactiae* | Ariadne | 464 957 | 2 159 783 |
MOCK20 TELL-Seq | Staphylococcus epidermidis* | Ariadne | 489 177 | 2 575 951 |
MOCK20 TELL-Seq | Streptococcus mutans* | Ariadne | 906 518 | 2 031 444 |
MOCK20 TELL-Seq | Staphylococcus aureus* | Ariadne | 106 598 | 2 915 427 |
MOCK5 10x | Enterobacter cloacae* | Reference | 13 628 | 5 598 796 |
MOCK20 10x | Pseudomonas aeruginosa | Reference | 5 477 921 | 6 374 461 |
MOCK20 10x | Rhodobacter sphaeroides | Reference | -580 531 | 4 366 774 |
MOCK20 10x | Staphylococcus epidermidis | Reference | 639 974 | 2 575 951 |
MOCK20 TELL-Seq | Bacillus cereus | Reference | 1 551 522 | 5 442 819 |
MOCK20 TELL-Seq | Staphylococcus epidermidis* | Reference | 1 503 747 | 2 575 951 |
MOCK20 TELL-Seq | Streptococcus agalactiae* | Reference | 2 047 925 | 2 159 783 |
MOCK20 TELL-Seq | Streptococcus mutans* | Reference | 2 012 488 | 2 031 444 |
MOCK20 TELL-Seq | Staphylococcus aureus* | Reference | 134 663 | 2 915 427 |