Fig. 1
From: GreenHill: a de novo chromosome-level scaffolding and phasing tool using Hi-C
Overview of GreenHill. a GreenHill receives assembled contigs from other assembler as inputs. Any format of contigs is acceptable, such as paired-haplotype, pseudo-haplotype, and haplotype-ignorant styles. b Contig pairs that consist of the same loci from homologous chromosomes were identified, and each contig pair was merged into a single contig as consensus contig. c Consensus contigs were scaffolded using long reads. d Consensus contigs were scaffolded using Hi-C. e Consensus contigs were divided into two contigs and phased using long reads and Hi-C