Fig. 2
From: Multi-omics analysis dissects the genetic architecture of seed coat content in Brassica napus
SCC-related gene modules and co-expression networks in seeds. a Gene correlation network of SCC-related module (M65) at 20 DAF. Phenylpropanoid biosynthesis-related genes significantly associated to SCC detected by TWAS at 20 DAF are labeled in the module. b Gene correlation network of SCC-related modules (M97, M79, M139) at 40 DAF. Phenylpropanoid biosynthesis-related genes significantly associated to SCC detected by TWAS at 40 DAF are labeled in the module. c Correlation between the expression pattern (X-axis) of M65 and SCC (Y-axis). d Correlation between the expression pattern (X-axis) of M139 and SCC (Y-axis). e Correlation network built on the overlapped genes of the TWAS-significant genes, M65 and M139. The green dots represent phenylpropanoid biosynthesis-related transcription factors and red dots represent other phenylpropanoid biosynthesis-related genes, the blue dots represent the rest of genes. The size of a node is proportional to its degree (the number of correlated genes). Genes in a, b, and e are shown by dots and gene-gene correlations (FDR < 0.01) are indicated by gray lines