From: Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data
Sqrt(CPMedian), PCA
Pearson residuals, PCA
GLM-PCA
33k PBMC
31 s
35 s
15 h
33k PBMC, 1000 HVGs
3 s
4 s
4 h
2M organogenesis, 2000 HVGs
166 s
224 s
52 h