Skip to main content

Table 4 Spearman correlation gap for WGAN-GP, InfoWGAN-GP, PCA, MichiGAN-PCA, VAE, β-TCVAE, and MichiGAN on the two splatter-simulated single-cell RNA-seq datasets

From: MichiGAN: sampling from disentangled representations of single-cell data using generative adversarial networks

Model

Linear step

Non-linear step

WGAN-GP

0.07 ±0.02

0.10 ±0.06

InfoWGAN-GP

0.05 ±0.05

0.04 ±0.02

PCA

0.68 ±0.00

0.72 ±0.00

MichiGAN-PCA

0.65 ±0.01

0.68 ±0.00

VAE

0.3 ±0.04

0.27 ±0.07

β-TCVAE

0.18 ±0.05

0.16 ±0.06

MichiGAN

0.18 ±0.04

0.15 ±0.05

  1. The mean and standard deviation are presented for each method over 5 runs
Back to article page

Genome Biology

ISSN: 1474-760X

Contact us