Category | RYP1 | Lovell v2.0 |
---|---|---|
Total assembly size (Mb) | 239.1 | 227.4b |
Number of contigs | 87 | 2525b |
Largest contigs (Mb) | 25.9 | 1.5b |
Contig N50 | 11.5 Mb | 255.4 kbb |
Sequences anchored to chromosomes (Mb) | 235.0 | 225.7b |
Genomic GC content (%) | 37.6 | 37.0 |
Number of gaps | 54 | 1828 |
Complete BUSCOs (%)a | 97.4 | 97.6 |
LTR assembly index, LAI | 22.33 | 21.29 |
Intact LTR length (Mb)/number | 10.50/1656 | 8.84/1416 |
Repetitive sequences (Mb)/(%) | 115.01/48.11 | 101.99/44.85 |
Protein-coding genes | 32,604 | 31,972b |
Transcripts | 37,827 | 47,089 |
Average gene length (bp) | 2223 | 2215 |