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Table 1 Comparison of the new giant panda genome with previously published assemblies

From: Chromosome-level genome assembly for giant panda provides novel insights into Carnivora chromosome evolution

 

This study

ASM200744v1

AilMel_1.0

Total size of assembled scaffolds

2,445,001,150

2,428,263,693

2,299,509,015

Number of scaffolds

77,897

57,414

81,467

Scaffold N50

23,473,669

9,947,519

1,281,781

Scaffold L50

34

75

521

Longest scaffold

81,377,464

32,438,596

6,047,896

GC content

41.69%

41.69%

41.60%

Unresolved bases per 100 Kb

1937.47

1927.02

2356.86

Repeat region of assembly

41.05%

41.29%

34.7%

Number of gene models

22,284

23,371

22,154