Dataset | Batch | Protocol | Number of cells | Cell types (number of cells) |
---|---|---|---|---|
2D Gaussian | Batch1 | Simulation | 2000 | Type1 (855), Type2 (237), Type3 (373), Type4 (535) |
Batch2 | Simulation | 2000 | Type1 (379), Type2 (656), Type3 (102), Type4 (863) | |
Splatter | Batch1 | Splatter | 2000 | Type1 (810), Type2 (616), Type3 (388), Type4 (186) |
Batch2 | Splatter | 1000 | Type1 (439), Type2 (262), Type3 (201), Type4 (98) | |
Pancreas | Muraro | CEL-Seq2 | 2042 | alpha (812), beta (448), gamma (101), delta (193), epsilon (3), acinar (219), ductal (245), endothelial (21) |
Baron | inDrop | 8012 | alpha (2326), beta (2525), gamma (255), delta (601), epsilon (18), acinar (958), ductal (1077), endothelial (252) | |
Segerstolpe | SMART-seq2 | 2061 | alpha (886), beta (270), gamma (197), delta (114), epsilon (7), acinar (185), ductal (386), endothelial (16) | |
PBMC | PBMC | 10x Chromium | 8381 | Â |
Pan T cell | 10x Chromium | 3555 | Â |