Table 1 Tree error
From: Skmer: assembly-free and alignment-free sample identification using genome skims
Dataset | Sequencing effort | Mash | Skmer | AAF (uncorrected) | AAF (corrected) |
|---|---|---|---|---|---|
Anopheles | 0.1 G | 23.19% | 1.07% | 19.92% | 6.36% |
| Â | 0.5 G | 12.84% | 0.45% | 9.74% | 4.9% |
| Â | 1 G | 8.92% | 0.37% | 9.59% | 3.3% |
| Â | Mixed | 14.75% | 0.58% | 8.46% | 8.45% |
Drosophila | 0.1 G | 23.87% | 2.05% | 20.29% | 5.85% |
| Â | 0.5 G | 13.33% | 0.72% | 10.37% | 5.25% |
| Â | 1 G | 7.11% | 0.58% | 10.84% | 2.2% |
| Â | Mixed | 16.58% | 1.11% | 11.36% | 10.87% |
Birds | 0.1 G | 37.03% | 5.64% | 31.81% | 21.13% |
| Â | 0.5 G | 25.16% | 1.91% | 20.8% | 6.86% |
| Â | 1 G | 19.42% | 1.19% | 15.54% | 1.05% |
| Â | Mixed | 28.14% | 3.08% | 18.15% | 7.57% |