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Fig. 3 | Genome Biology

Fig. 3

From: Insights into the design and interpretation of iCLIP experiments

Fig. 3

Proportion of non-coinciding cDNA-starts differs between PTBP1 iCLIP experiments. a Heatmap for PTBP1-iCLIP1 generated using the previously developed software iCLIPro [8] to show the relative positioning of cDNA-starts of shorter iCLIP cDNAs (17–39 nt) compared to cDNA-starts of long cDNAs (longer than 39 nt). b As in (a), but for cDNAs of PTBP1-iCLIP1 that overlap with 5–30 nt long crosslink clusters. c As in (a), but for cDNAs of PTBP1-iCLIP1 that overlap with >30 nt long crosslink clusters. d As in (a), but for PTBP1-iCLIP2. e As in (a), but for cDNAs of PTBP1-iCLIP2 that overlap with 5–30 nt long crosslink clusters. f As in (a), but for cDNAs of PTBP1-iCLIP2 that overlap with >30 nt long crosslink clusters

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