Sample | # merged | % merged | # reads after C&M | # mapped reads | Duplicates |
---|---|---|---|---|---|
name | reads | reads | prior to mapping | prior to DeDup | removed with DeDup |
3077 | 5,437,812 | 94.78 % | 5,737,174 | 1,023,502 | 410,234 |
Jorgen625 | 12,956,100 | 80.5 % | 16,093,580 | 2,659,178 | 94,005 |
Refshale16 | 32,041,091 | 73.61 % | 43,528,407 | 12,782,665 | 3,872,555 |
SK2 | 51,364,343 | 99.27 % | 51,741,310 | 48,211,553 | 47,353,377 |
SK8 | 7,683,942 | 72.5 % | 10,597,941 | 1,227,067 | 185,913 |