From: A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome
Assembly | W7984 (WGS, this report) | Chinese Spring (chromosome sorted shotgun, IWGSC 2014) |
---|---|---|
Scaffolds ≥1kbp | 645,811 | 2,272,234 |
8.00 Gbp | 7.05 Gbp | |
Map-anchored scaffolds ≥1 kbp (percentage of total assembled base pairs) | 437,973 | 1,175,794 |
7.13 Gbp (89.3%) | 4.46 Gbp (63.2%) | |
Scaffolds ≥10 kbp | 253,986 | 91,141 |
6.55 Gbp | 1.31 Gbp | |
Map-anchored scaffolds ≥10 kbp (percentage of total assembled base pairs) | 235,647 | 74,520 |
6.21 Gbp (94.9%) | 1.08 Gbp (82.3%) | |
Full-length cDNAs captured on the assembly (at least 50% length; out of 6,000) | 4,663 (77.7%) | 4,580 (76.3%) |
(minimum length 25%) | 5,288 (88.1%) | 5,428 (90.5%) |
Full-length cDNAs placed on map-anchored scaffolds (at least 50% length) | 4,353 (72.6%) | 3,404 (56.7%) |
Full-length cDNAs placed on map-anchored scaffolds (at least 25% length) | 4,863 (81.1%) | 3,909 (65.2%) |
Concordance of POPSEQ positions | 99.4% |