From: Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome
Repeat class | Total repeat family length (kb) | Number of repeat families | Percentage of RepeatScout library | Percentage of genome* | Repeat family length range (bp) | Repeat family average length (bp) | Repeat family copy number range | Repeat family average copy number | Repeat family GC content range (%) | Repeat family average GC content (%) |
---|---|---|---|---|---|---|---|---|---|---|
HighA†| 26.1 | 31 | 1.9 | 7.1 | 160-1,771 | 841 | 323-4,337 | 1,368 | 23.05-33.75 | 28.37 |
Mid‡ | 220.3 | 304 | 15.6 | 7.4 | 67-4,881 | 725 | 11-1,746 | 204 | 13.46-47.51 | 30.19 |
Low§ | 738.2 | 3,237 | 52.3 | 4.7 | 51-4,520 | 228 | 3-215 | 14 | 12.28-71.15 | 33.61 |
HighB¶ | 4.6 | 5 | 0.3 | 1.6 | 982-1,277 | 921 | 432-3,531 | 1,306 | 26.58-31.32 | 29.67 |
360 bp satelliteÂĄ | 0.4 | 1 | 0.2 | 0.3 | - | - | 1,122 | - | - | 26.31 |
Transposable elements# | 406.2 | 896 | 28.9 | 4.4 | 51-11,289 | 453.3 | 3-2,471 | 27 | 15.28-65.93 | 38.59 |