Table 1 Strain numbers, phylogenetic position and PBS characteristics of all marine Synechococcus spp. mentioned in this paper
From: Diversity and evolution of phycobilisomes in marine Synechococcusspp.: a comparative genomics study
Strain name | RCC number | Subcluster | Clade | Pigment type | PUB:PEB | PEI form | PEII form | PC form | References |
|---|---|---|---|---|---|---|---|---|---|
WH5701†| 1,084 | 5.2 | NA | 1 | NA | NA | NA | C-PC | PC: this paper |
RS9917†| 556 | 5.1 | VIII | 1 | NA | NA | NA | C-PC | PC: this paper |
WH7805†| 1085 | 5.1 | VI | 2 | NA | A* | NA | R-PCIII | PC: [17] PE: [36] |
WH8018 | 649 | 5.1 | VI | 2 | NA | A* | NA | C-PC | PC: this paper PE: [36] |
WH7803†| 752 | 5.1 | V | 3a | WL: 0.440 ± 0.004 BL: 0.443 ± 0.006 | A | A | R-PCII | PC: [16] PE: [18] |
Almo03 | 43 | 5.1 | I | 3a | WL: 0.417 ± 0.017 BL: ND | A | A | ND | PE: this paper |
RS9912 | 551 | 5.1 | II | 3a | WL: 0.435 ± 0.004 BL: 0.438 ± 0.003 | A | A | ND | PE: this paper |
RCC307†| 307 | 5.1 | X | 3b | WL: 0.775 ± 0.103 BL: 0.761 ± 0.002 | WL: A BL: ND | WL: B BL: ND | ND | PE: this paper |
CC9311†| 1,086 | 5.1 | I | 3d (CA) | WL: 0.719 ± 0.060 BL: 1.603 ± 0.023 | ND | ND | ND | - |
CC9902†| - | 5.1 | IV | 3d (CA) | Variable between WL and BL | ND | ND | ND | B Palenik, personal communication |
BL107†| 515 | 5.1 | IV | 3d (CA) | WL: 0.735 ± 0.003 BL = 1.695 ± 0.149 | ND | ND | ND | - |
RS9916†| 555 | 5.1 | IX | 3d (CA) | WL: 0.733 ± 0.003 BL: 1.659 ± 0.054 | ND | WL: B BL:ND | ND | PE: this paper |
WH8020 | 751 | 5.1 | I | 3d (CA) | WL: 0.737 ± 0.003 BL:1.626 ± 0.042 | WL: A BL: ND | WL: B BL: ND | R-PCII | PC: [16] PE: [18] |
M11.1 | 790 | 5.1 | - | 3d (CA) | WL: 0.731 ± 0.004 BL: 1.849 ± 0.101 | WL: B BL: B | WL: B BL: C | ND | PE: [34] |
M16.17 | 793 | 5.1 | - | 3d (CA) | WL: 0.719 ± 0.015 BL: 1.826 ± 0.140 | WL: B BL: B | WL: B BL: C | ND | PE: [34] |
WH8103 | 29 | 5.1 | III | 3c | WL: 1.156 ± 0.014 BL: 1.154 ± 0.012 | B | C | R-PCII | PC: [16] PE: [18] |
WH8102†| 539 | 5.1 | III | 3c | WL: 1.856 ± 0.117 BL: 1.903 ± 0.128 | B | C | ND | PE: [19] |
CC9605†| 753 | 5.1 | II | 3c | WL: 2.136 ± 0.083 BL: 1.999 ± 0.187 | B | C | ND | PE: this paper |
Oli31 | 44 | 5.1 | VII | 3c | WL: 1.741 ± 0.012 BL: 1.774 ± 0.046 | B | C | ND | PE: this paper |