From: Promotech: a general tool for bacterial promoter recognition
Model | M. smegmatis | L. phytofermentans | B. amyloliquefaciens | R. capsulatus | Mean AUROC |
---|---|---|---|---|---|
RF-HOT | 0.939 | 0.591 | 0.640 | 0.660 | 0.708 ± 0.157 |
RF-TETRA | 0.814 | 0.608 | 0.837 | 0.674 | 0.733 ± 0.110 |
GRU-0 | 0.630 | 0.488 | 0.496 | 0.577 | 0.548 ± 0.068 |
GRU-1 | 0.601 | 0.487 | 0.502 | 0.566 | 0.539 ± 0.054 |
LSTM-3 | 0.622 | 0.489 | 0.481 | 0.553 | 0.536 ± 0.066 |
LSTM-4 | 0.592 | 0.498 | 0.506 | 0.546 | 0.536 ± 0.043 |
MULTiPly | 0.684 | 0.470 | 0.700 | 0.593 | 0.612 ± 0.106 |
iPro70-FMWin | 0.642 | 0.587 | 0.779 | 0.575 | 0.646 ± 0.093 |
bTSSFinder | (0.272, 0.265) | (0.944, 0.924) | (0, 0) | (0.250, 0.245) | NA |
G4PromFinder | (0.938, 0.932) | (0.216, 0.269) | (0.339, 0.554) | (0.960, 0.953) | NA |
BProm | (0.006, 0.002) | (0.560, 0.398) | (0.421, 0.181) | (0.011, 0.007) | NA |