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Table 1 Summary statistics of the SV true sets

From: Evaluating nanopore sequencing data processing pipelines for structural variation identification

 

NA12878 deletion

NA12878 insertion

CHM13 deletion

CHM13 insertion

CHM1 deletion

CHM1 insertion

Chr20 deletion

Chr20 insertion

SV count

4352

5783

10,671

20,497

10,784

15,158

96

181

Median size (bp)

312

300

304

318

69

103

318

296

Longest size (bp)

97,696

41,311

26,862

32,727

18,511

71,339

10,937

41,310

Shortest size (bp)

34

32

50

51

31

32

50

40