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Fig. 4 | Genome Biology

Fig. 4

From: eIF4A2 drives repression of translation at initiation by Ccr4-Not through purine-rich motifs in the 5′UTR

Fig. 4

a Equilibrium binding of eIF4A1 and eIF4A2 to RNA substrates. Direct fluorescence polarization measurement of 5′ FAM-RNA/eIF4A association for wild-type eIF4A1 (gold) and eIF4A2 (red) in the absence (control) or presence (+ silvestrol) of 10 μM silvestrol. Representative plot for 20 nt (AG)10 (solid lines), (CAA)6CA (dashed lines) oligo association. Raw data were converted to changes in anisotropy. Shown are the mean ± SD of triplicates. b Dissociation constants (KD) of the binding of eIF4A1 and eIF4A2 to different FAM-labeled RNAs in the presence and absence of silvestrol. c Schematic representation of the competition experiments with simultaneous incubation of multiple RNAs with eIF4A. The binding of eIF4A1 and eIF4A2 with and without silvestrol to labeled (AG)10 in the presence of (CAA)6CA competitor ssRNA at increasing molar excess was analyzed using EMSA. Dissociation constants have been derived from fitting the binding data. Data represents mean ± SD, n = 3

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