From: KrakenUniq: confident and fast metagenomics classification using unique k-mer counts
 | Kraken | KrakenUniq | ||
---|---|---|---|---|
Default | Exact(1) | Exact(2) | ||
Computational performance | ||||
 Wall clock time3 | 17m38s | 14m18s | 3h30m6s | 45m30s |
 Speed [Mbp/m] | 478.4 | 595.4 | 95.9 | 377.8 |
 Memory [GB] | 167.1 | 168.2 | 466.2 | 272.4 |
 Minor page faults × 106 | 203.5 | 192.2 | 272.5 | 904.6 |
Classification performance | ||||
 Recall | 0.827 | 0.888 | 0.888 | 0.888 |
 F1 score | 0.922 | 0.935 | 0.935 | 0.935 |