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Fig. 3 | Genome Biology

Fig. 3

From: BGP: identifying gene-specific branching dynamics from single-cell data with a branching Gaussian process

Fig. 3

Synthetic data: fitting BGP and BEAM. The horizontal axis depicts the pseudotime. a The true branching times (black dots), BEAM times (red crosses), BGP mean (blue dots) and 98% credible regions for all 40 synthetic genes. b,c BGP and BEAM estimates for the same early-branching gene. Gene expression is depicted on the vertical axis. The vertical grey bar is the global branching time. The vertical red dashed bar is the BEAM branching time estimate and the vertical magenta bar the BGP estimate. Cells have been coloured by the global assignment. BEAM branch expression analysis modelling, BGP branching Gaussian process

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Genome Biology

ISSN: 1474-760X

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