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Fig. 6 | Genome Biology

Fig. 6

From: DESMAN: a new tool for de novo extraction of strains from metagenomes

Fig. 6

Geographic distribution of TARA_MED_MAG_00110 haplotypes. Top panel: Box plot of each haplotype’s relative abundance across the 11 regions where more than one sample had coverage greater than one. Bottom panel: The top left subpanel gives the total normalised relative abundance of the entire MAG. The other three subpanels give relative haplotype abundance for the three confidently inferred variants within this MAG. Results are shown for the 33 of 61 surface samples for which this MAG had coverage greater than 1. All three haplotypes were significantly associated with geographic region based on Kruskal–Wallis ANOVAs (H2: χ 2=20.9, p-value = 0.0074; H3: χ 2=17.8, p-value = 0.023; H4: χ 2=23.1, p-value = 0.0032). MAG metagenome-assembled genome, Mediterranean (MED), Athlantic South-West (ASW), Indian Ocean North (ION), Pacific South-East (PSE), Pacific South-West (PSW), Indian Ocean South (IOS), Pacific Ocean North (PON), Red Sea (RED)

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