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Table 1 HPLC analysis of tRNAPhe nucleoside content from an S. cerevisiae trm82∆ strain expressing TRM82 variants

From: Mutation in WDR4 impairs tRNA m7G46 methylation and causes a distinct form of microcephalic primordial dwarfism

Mod.

Mol. exp.

wt (CEN vec)

trm82∆ (CEN TRM82)

trm82∆ (CEN vec)

trm82∆ (CEN trm82-K223L)

trm82∆ (CEN trm82-K223R)

30 °C

m7G

1

0.41 ± 0.04

0.34 ± 0.03

<0.03

0.21 ± 0.01

0.32 ± 0.04

Ψ

2

2.09 ± 0.06

1.94 ± 0.03

1.85 ± 0.04

1.99 ± 0.07

2.06 ± 0.05

Cm

1

0.89 ± 0.09

0.92 ± 0.05

0.93 ± 0.08

0.95 ± 0.03

0.93 ± 0.06

Gm

1

0.72 ± 0.01

0.76 ± 0.07

0.76 ± 0.03

0.73 ± 0.08

0.75 ± 0.02

m5C

2

1.53 ± 0.06

1.64 ± 0.07

1.69 ± 0.03

1.66 ± 0.06

1.59 ± 0.03

m2G

1

0.78 ± 0.02

0.83 ± 0.04

0.87 ± 0.02

0.83 ± 0.04

0.82 ± 0.03

37 °C

m7G

1

0.37 ± 0.03

0.21 ± 0.03

<0.03

<0.03

0.18 ± 0.02

Ψ

2

2.00 ± 0.08

1.91 ± 0.06

1.87 ± 0.01

1.82 ± 0.10

1.92 ± 0.01

Cm

1

0.98 ± 0.08

1.00 ± 0.14

0.91 ± 0.02

0.93 ± 0.05

0.90 ± 0.04

Gm

1

0.77 ± 0.03

0.84 ± 0.02

0.91 ± 0.05

0.96 ± 0.02

0.84 ± 0.02

m5C

2

1.63 ± 0.03

1.69 ± 0.02

1.79 ± 0.05

1.76 ± 0.04

1.71 ± 0.02

m2G

1

0.82 ± 0.05

0.88 ± 0.02

0.90 ± 0.07

0.94 ± 0.06

0.86 ± 0.02

  1. Mean and standard deviation based on three individual growths and RNA preparations