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Fig. 5 | Genome Biology

Fig. 5

From: OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy

Fig. 5

Inference of orthogroups of plant transcription factors. In all cases dark grey bars indicate the results for OrthoFinder and light grey bars indicate the results for OrthoMCL. a Comparison of the fraction of transcription factors that are assigned to orthogroups by OrthoFinder and by OrthoMCL. b Comparison of the number of transcription factor orthogroups identified using each method. c The percentage of RBNH/RBH (for OrthoFinder/OrthoMCL) hits that are not contained in orthogroups identified using each method. d The number of transcription factors of the same type that each transcription factor is connected to in the orthogroups produced by OrthoFinder. e as in (d) but for OrthoMCL. f Comparison of species coverage for transcription factor orthogroups identified by each method. g The number of orthogroups for each transcription factor type identified by OrthoFinder

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Genome Biology

ISSN: 1474-760X

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