Figure 6
From: Cis-regulatory somatic mutations and gene-expression alteration in B-cell lymphomas
xseq results. Cancer genes predicted by the xseq tool from the cohort 1 (A) and cohort 2 (B) data sets. Each row corresponds to a predicted gene and each column to a cancer sample. When a gene is predicted in a specific sample, a colored box is drawn. Box colors indicate the type of mutation associated with the gene (in protein-coding exons only, brown; in TFBS only, green; in protein-coding exon and TFBS, orange; in a TFBS only and predicted to disrupt the TFBS, pink; and in protein-coding exon and TFBS and predicted to disrupt the TFBS, purple). The histograms on the right sum the number of samples where the gene is predicted (using the same box colors). The histograms at the top sum the number of genes predicted by xseq in samples (using the same box colors). Cohort 2 sample names (B) are color-coded as defined in Figure 1. PC, protein coding; TFBS, transcription factor binding site.