Table 2 Numbers and proportions (in percentage) of differentially expressed genes for different gene categories under three different comparisons: normal vs. lesional psoriatic skin (NN vs. PP), uninvolved vs. lesional psoriatic skin (PN vs. PP), and normal vs. uninvolved skin (NN vs. PN)
| Â | Â | Â | Â | Â | Novel | ||||
|---|---|---|---|---|---|---|---|---|---|
No. DEGs (%) | Protein coding (n = 14,011) | Antisense (n = 2,294) | Pseudogene (n = 1,476) | Annotated lncRNA (n = 2,942) | Total (n = 1,080) | Intronic (n = 196) | Intergenic (n = 840) | Interleaving (n = 15) | Encompassing (n = 29) |
NN vs. PP | 2,342 | 408 | 138 | 709 | 505 | 81 | 396 | 9 | 19 |
(17%) | (18%) | (9%) | (24%) | (47%) | (41%) | (47%) | (60%) | (66%) | |
PN vs. PP | 2,146 | 369 | 161 | 613 | 436 | 76 | 337 | 8 | 15 |
(15%) | (16%) | (11%) | (21%) | (40%) | (39%) | (40%) | (53%) | (52%) | |
NN vs. PN | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
(0.03%) | (0%) | (0%) | (0%) | (0%) | (0%) | (0%) | (0%) | (0%) | |