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Figure 1 | Genome Biology

Figure 1

From: GoIFISH: a system for the quantification of single cell heterogeneity from IFISH images

Figure 1

Overview of GoIFISH GoIFISH, including computational capabilities. (A) The GoIFISHGoIFISH graphical user interface (B) Outputs from GoIFISHGoIFISH including nuclear and membrane segmentation, spot detection, manually edited segmentation, and topology maps (C) Cell classification. After cell segmentation, cells are labelled as tumor (green) or stromal (yellow) by the user. Cells are automatically classified using the marked cells as training data.

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