Table 2 Composition of the repeat elements in the N.
From: Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis
| Â | N. sylvestris | N. tomentosiformis | ||
|---|---|---|---|---|
Repeat element | Number of bases | % | Number of bases | % |
LINE | 5,828,979 | 0.27 | 2,834,174 | 0.17 |
SINE | 4,040,138 | 0.18 | 5,244,169 | 0.31 |
LTR/copia | 203,592,581 | 9.13 | 227,491,087 | 13.43 |
LTR/gypsy | 463,070,166 | 20.75 | 343,784,620 | 20.32 |
LTR/others | 184,881,207 | 8.28 | 90,166,206 | 5.33 |
Transposons | 33,621,895 | 1.51 | 22,593,004 | 1.34 |
Retrotransposons | 230,653,066 | 10.33 | 220,727,245 | 13.05 |
Simple repeats | 4,954,900 | 0.22 | 4,809,855 | 0.28 |
Low complexity | 10,145,060 | 0.45 | 9,723,109 | 0.57 |
Others | 95,243,945 | 4.28 | 130,185,895 | 7.72 |
Unknown | 197,792,439 | 8.86 | 116,127,639 | 6.86 |
Total | 1,605,541,978 | 71.95 | 1,266,206,541 | 74.84 |