From: Gene regulatory networks in plants: learning causality from time and perturbation
Methods | Information richness | Scalability | References |
---|---|---|---|
Correlation/mutual information | Low | High (thousands of genes) | |
Partial correlation | Medium | Medium (up to 100 genes using heuristics) | |
Differential equations | Medium | Medium | |
Linear regression | Medium | Medium | [38] |
Non-linear regression | High | Low (up to 25 genes) | [38] |
Boolean | High | Low (up to 25 genes) |