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Table 3 Polymorphism resources in forest trees

From: Open access to tree genomes: the path to a better forest

Family

Genus

Species

SNP

access

Polymorphism

Related Publications

Pinaceae

Pinus

taeda (loblolly pine)

[14, 19]

GoldenGate & Infinium iSelect

[95, 96]

 

Pinus

lambertiana (sugar pine)

[14]

GoldenGate array

[24]

 

Pseudotsuga

menziesii (Douglas-fir)

[14]

GoldenGate array

[25]

   

[19]

Infinium iSelect

[64]

 

Pinus

sylvestris (Scots pine)

[14]

GoldenGate array

 
 

Pinus

pinsater (maritime pine)

[14]

GoldenGate array

[27, 90]

 

Pinus

radiata (Monterey pine)

[14]

GoldenGate array

[29]

 

Picea

abies (Norway spruce)

[14]

GoldenGate array

[30]

 

Picea

glauca (white spruce)

[19]

GoldenGate & Infinium iSelect

[97, 98]

Salicaceae

Populus

trichocarpa (black cottonwood)

[19, 99]

Infinium iSelect

[100]

    

Infinium iSelect (Restricted)

[36]

   

[14]

GoldenGate array

[101]

   

[19, 99]

SNP assay

[102]

 

Populus

nigra (black poplar)

[14]

GoldenGate array

[103]

Myrtaceae

Eucalytpus

grandis (rose gum)

[104]

DArT high-density array

[105]

   

[106]

GoldenGate array

[106]

 

Eucalyptus

camaldulensis (river red gum)

 

RNA-Seq SNP discovery (restricted)

[107]

  1. Details current genotyping projects in forest trees with data access information and relevant publications.