SRR204026 | Unique mapping (%)a | Estimated noise (%)b | Timing |
---|
BatMeth (fast) | 39.6 | 0.47 | 77 s |
BatMeth (default) | 45.8 | 0.94 | 247 s |
BatMeth (sensitive) | 52.1 | 1.75 | 521 s |
B-SOLANAc | 37.4 | 2.06 | 130 s |
SOCS-Bd | 28.3 | 4.55 | ~71 h |
- aWe tabulated the unique mapping rates of the 100,000 reads. bThe error rates are estimated from the number of reverse-strand mappings as stated by Equation 2 in Materials and methods. cNote that 3.26% of B-SOLANA's resultant reads are double-counted as B-SOLANA reported two hits for them. One of the two hits is assumed to be correct for the estimation of the noise rate of B-SOLANA. dReverse-strand mapping is allowed by enabling G-A transitions in SOCS-B. BatMeth fast, default, and sensitive modes were run with -n0-N3, -n0-N4, -n0-N5 as parameters, respectively.