Skip to main content

Advertisement

Table 3 Gene essentiality in models 1 and 3 at two threshold ratios (the highest percentage achieved for each prediction metric appears in bold)

From: MetaMerge: scaling up genome-scale metabolic reconstructions with application to Mycobacterium tuberculosis

  Model 1 [13] Model 3
Predictions in Threshold 0.1 Threshold 0.2 Threshold 0.1 Threshold 0.2
True positive 106 139 49 63
False positive 97 64 40 26
True negative 325 285 508 436
False negative 56 96 129 201
Positive predictive value (%) 52 68 55 71
Negative predictive value (%) 85 75 80 68
Correct predictions (%) 74 73 77 69