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Table 1 Ordered list of Ich mitochondrial genes

From: Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control

Start

End

Accession number

Product name

Gene symbol

T. thermophila a

823

742

IMG5_M206942

tRNA-Tyr-2

tRNA-Tyr-2

√

1217

941

IMG5_M206943

LSU rRNA

rnl_a_1

√

     

tRNA-Leu

3687

1410

IMG5_M206944

LSU rRNA

rnl_b_1

√

5041

3695

IMG5_M206945

Ymf 66

ymf66 b

ymf57 b

5301

4999

IMG5_M206946

Ymf57

ymf57 b

ymf66 b

6607

5441

IMG5_M206947

Ymf76

ymf76

√

7446

6622

IMG5_M206948

Ribosomal protein S13

rps13

√

7903

7424

IMG5_M206949

Ribosomal protein S3

rps3

√

8202

7903

IMG5_M206950

Ribosomal protein S19

rps19

√

8996

8208

IMG5_M206951

Ribosomal protein L2

rpl2

√

9471

8977

IMG5_M206952

Hypothetical protein

Hypotheticalc

ymf74

9961

9455

IMG5_M206953

NADH dehydrogenase subunit 10

nad10

√

10381

9977

IMG5_M206954

Ribosomal protein S12

rps12

√

10914

10393

IMG5_M206955

NADH dehydrogenase subunit 2

nad2

√

10922

12214

IMG5_M206956

NADH dehydrogenase subunit 7

nad7

√

12220

12522

IMG5_M206957

Ribosomal protein S14

rps14

√

12522

13082

IMG5_M206958

Ymf60

ymf60

√

14068

13079

IMG5_M206959

Ymf64

ymf64

√

14748

14170

IMG5_M206960

Ymf75

ymf75

√

14821

14750

IMG5_M206961

tRNA-Phe-1

tRNA-Phe

√

     

nad1_b b

15055

14828

IMG5_M206962

ATP synthase F0 subunit 9

atp9

√

15863

15060

IMG5_M206963

Ymf63

ymf63

√

16966

15881

IMG5_M206964

Ymf65

ymf65

√

     

ymf69

17653

17174

IMG5_M206965

Ymf59

ymf59

√

18096

17656

IMG5_M206966

Ribosomal protein L16

rpl16

√

19722

18163

IMG5_M206967

Heme maturase

yejR

√

20433

19726

IMG5_M206968

Ymf61

ymf61

√

     

tRNA-His

20829

20464

IMG5_M206969

NADH dehydrogenase subunit 3

nad3

√

     

ymf72

21193

20852

IMG5_M206970

Ymf58

ymf58

√

21795

21214

IMG5_M206971

NADH dehydrogenase subunit 9

nad9

√

25990

21839

IMG5_M206972

Ymf77

ymf77

√

28327

28148

IMG5_M206973

NADH dehydrogenase subunit 1

nad1_b b

 

28510

29802

IMG5_M206974

Apocytochrome b

cob

√

29792

31885

IMG5_M206975

NADH dehydrogenase subunit 5

nad5

√

31902

33521

IMG5_M206976

Cytochrome c oxidase subunit 2

cox2

√

33532

33735

IMG5_M206977

SSU rRNA

rns_a

√

33783

35202

IMG5_M206978

SSU rRNA

rns_b

√

35555

36841

IMG5_M206980

Ymf67

ymf67

√

36862

36932

IMG5_M206981

tRNA-Trp-1

tRNA-Trp

√

36961

38583

IMG5_M206982

Ymf68

ymf68

√

38587

38865

IMG5_M206983

Hypothetical protein

Hypotheticalc

ymf71

38942

41014

IMG5_M206984

Cytochrome c oxidase subunit 1

cox1

√

41015

41923

IMG5_M206985

NADH dehydrogenase subunit 1

nad1_a

√

41847

42605

IMG5_M206986

Ymf62

ymf62

√

42627

42986

IMG5_M206987

Ribosomal protein L14

rpl14

√

     

tRNA-Glub

43012

43278

IMG5_M206988

Ymf70

ymf70

√

43284

44807

IMG5_M206989

NADH dehydrogenase subunit 4

nad4

√

44811

45284

IMG5_M206990

Ymf73

ymf73

√

45323

45393

IMG5_M206991

tRNA-Glu-1

tRNA-Glub

 

45404

47681

IMG5_M206992

LSU rRNA

rnl_b_2

√

     

tRNA-Leu

47874

48150

IMG5_M206993

LSU rRNA

rnl_a_2

√

48267

48348

IMG5_M206994

tRNA-Tyr-1

tRNA-Tyr-1

tRNA-Met

  1. aA checkmark indicates that the T. thermophila mtDNA contains a homolog of the same gene in the same relative position and orientation. bDivergent gene order. c'Hypothetical' indicates insufficient evidence to assign gene name.
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Genome Biology

ISSN: 1474-760X

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