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Table 4 Top ten Gene Ontology categories using GOseq adjusted for total read count bias

From: Gene ontology analysis for RNA-seq: accounting for selection bias

GOID Term Ontology Rank standard Rank GOseq Median read count of genes in category
GO:0016020 Membrane CC 16 1 91
GO:0005886 Plasma membrane CC 96 2 50
GO:0005887 Integral to plasma membrane CC 313 3 36
GO:0005576 Extracellular region CC 4,310 4 18
GO:0015020 Glucuronosyl transferase activity MF 388 5 10
GO:0005783 Endoplasmic reticulum CC 6 6 197
GO:0016021 Integral to membrane CC 179 7 68
GO:0006470 Protein amino acid dephosphorylation BP 31 8 224
GO:0045944 Positive regulation of transcription from RNA polymerase II promoter BP 39 9 133
GO:0007049 Cell cycle BP 14 10 202
  1. BP, biological process; CC, cellular component; MF, molecular function.