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Table 1 Drop rate at an average accuracy of 0.99915

From: Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays

  Drop rate  
Dataset BRLMM CRLMM Relative rate
Affymetrix high-quality XBA arrays 0.0115 0.00575 2.00
Affymetrix high-quality HIND arrays 0.0446 0.0228 1.95
Affymetrix high-quality STY arrays 0.0873 0.0171 5.10
Broad Institute first-pass STY arrays - 0.241 -
Affymetrix first-pass STY arrays - 0.110 -
Affymetrix high-quality NSP arrays 0.086 0.0347 2.48
Broad Institute first-pass NSP arrays - 0.180 -
Affymetrix first-pass NSP arrays - 0.231 -
Chakravarti XBA replicate arrays - 0.110 -
Chakravarti NSP replicate arrays 0.42 0.0565 7.43
  1. Drop rates greater than 0.50 to reach the desired average accuracy are not considered.