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Figure 6 | Genome Biology

Figure 6

From: Model-based analysis of two-color arrays (MA2C)

Figure 6

Geometrical interpretation of the normalization method. Our method first subtracts the baseline from log intensity vectors within each GC bin and then projects the adjusted vectors onto v-axis, yielding log mean-scaled ratios of the Cy5 and Cy3 signals within each GC bin. Finally, the projected values are adjusted for variance.

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