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Table 3 Substitution score matrices for human-chimp and human-rhesus alignments

From: Fast-evolving noncoding sequences in the human genome

Alignment

A

C

G

T

Human-chimp

90

-330

-236

-356

 

-330

100

-318

-236

 

-236

-318

100

-330

 

-356

-236

-330

90

Human-rhesus

87

-226

-129

-255

 

-226

100

-212

-129

 

-129

-212

100

-226

 

-255

-129

-226

87