Skip to main content
Figure 6 | Genome Biology

Figure 6

From: cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers

Figure 6

EvoPrint analysis of the Drosophila snail cis-regulatory region. An EvoPrint of the Drosophila snail upstream early CNS, presumptive mesodermal, and early PNS enhancer regulatory region (2,974 bp) [4,41] was generated using the following genomes: D. melanogaster (reference sequence), D. sechellia, D. yakuba, D. erecta, D. ananassae, D. pseudoobscura, D. virilis, D. mojavensis and D. grimshawi. Due to breaks in co-linearity, sequencing gaps and/or sequencing ambiguities, as detected by EvoDifference analysis, D. simulans and D. persimilis were not included in the analysis. Invariant MCSs, shared by all species, are identified with uppercase black-colored letters. The three previously identified genomic restriction fragments [4] containing the CNS, mesodermal and PNS enhancers are highlighted by solid lines for neural enhancers and dotted lines for the mesodermal enhancer.

Back to article page