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Table 2 Number of consistently mapped scaffolds

From: The genome of Apis mellifera: dialog between linkage mapping and sequence assembly

Assembly version

3.0

4.0

Total number of scaffolds

9,863

9,868

Consistently mapped scaffolds

431

626

Number of scaffolds broken

2

2

Number of scaffolds with inconsistency ignored

7

2

  1. The increase of the number of mapped scaffolds (195) between version 3.0 and 4.0 of the genome assembly is less than the total number of unplaced scaffolds (379) in version 3.0 that were mapped in version 4.0 because many scaffolds were merged into previously mapped scaffolds or combined with other previously unmapped scaffolds.
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Genome Biology

ISSN: 1474-760X

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