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Table 4 TFBS enrichment in each of the eight clusters of diurnal genes

From: Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex

Cluster

PWM ID for TFBS

Fold enrichment

P value for enrichment

TF family name

1

M00036

1.345

0

v-Jun

 

M00248

1.631

0

Oct1

 

M00920

1.119

0

E2F

 

M00137

1.439

0.001

Oct1

 

M00494

1.614

0.003

STAT6

 

M01011

1.579

0.003

HNF1

2

M00411

1.383

0

HNF-4alpha1

 

M00712

1.457

0.001

Myogenin

 

M00331

1.505

0.003

Lentiviral_TATA

 

M00261

1.294

0.004

Olf-1

 

M00658

1.392

0.005

PU.1

3

M01066

1.577

0

BLIMP1

 

M00731

1.915

0.001

Osf2

 

M00655

1.3

0.003

PEA3

4

M00116

1.711

0.005

C/EBPalpha

 

M00123

1.39

0.005

c-Myc:Max

5

M00641

1.473

0

HSF

 

M00736

1.3

0.002

E2F-1:DP-1

6

M00634

1.355

0

GCM

 

M00083

1.284

0.002

MZF1

 

M01036

1.223

0.004

COUPTF

 

M00069

1.265

0.005

YY1

 

M00119

1.282

0.005

Max

7

None

   

8

M00762

1.446

0.004

PPAR,_HNF-4,_COUP,_RAR

  1. A more detailed list is available in Additional data file 3.
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Genome Biology

ISSN: 1474-760X

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