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Table 2 Geographic distribution of Asian domestic pigs

From: Population phylogenomic analysis of mitochondrial DNA in wild boars and domestic pigs revealed multiple domestication events in East Asia

Haplogroup

 

NEA (22)

UMYR (54)

DRYR (33)

URYZ (88)

MDYZ (174)

Mekong (174)

SC (46)

Japan (20)d

SA (6)

Other (42)

AN (33)c

Total (688)e

D1a1a

Individuals (%)a

72.7

22.2

72.7

12.5

51.1

13.3

10.9

2.6

0

14.3

12.1

25.8

D1a1a

Haplotypesb

4 (2)

1 (0)

0

9 (4)

15 (9)

4 (0)

5(0)

-

0

4 (2)

2 (1)

-

D1a2

Individuals (%)

0

38.9

0

52.3

1.7

13.3

0

0

0

0

0

14.7

D1a2

Haplotypes

0

0

0

6 (2)

1 (0)

10 (4)

0

0

0

0

0

-

D1a3

Individuals (%)

0

14.8

0

0

1.7

0

0

0

0

0

0

1.7

D1a*

Individuals (%)

0

0

0

6.8

7.5

2.2

34.8

0

0

4.8

12.1

6.4

D1b

Individuals (%)

0

0

0

0

0

26.1

0

6.6

0

45.2

0

14.1

D1b

Haplotypes

0

0

0

18.2

1 (0)

3 (1)

0

0

0

3 (0)

0

-

D1c

Individuals (%)

0

13.0

27.3

1.1

5.7

7.2

17.4

0

0

0

0

6.1

D1d

Individuals (%)

0

0

0

0

1.7

0

0

0

0

0

0

4.7

D1e

Individuals (%)

0

0

0

1.1

4.6

0.5

37.0

1.3

0

0

6.1

4.4

D1g

Individuals (%)

0

9.3

0

2.3

0.0

0

0

0

0

0

0

1.1

D1h

Individuals (%)

0

1.9

0

0

0.6

1.1

0

0

0

0

0

0.6

D1i

Individuals (%)

0

0

0

5.6

0

0

0

0

0

0

0

0.8

D1*

Individuals (%)

27.3

0

0

0

23.0

8.3

0

6.6

0

2.4

0

10.5

D2 to D4

Individuals (%)

0

0

0

0

0.6

27.8

0

26.3

66.7

28.6

27.3

13.6

D*

Individuals (%)

0

0

0

0

0

0

0

46.1

0

4.8

0

5.8

A1 without A1a

Individuals (%)

0

0

0

0

0

0

0

10.5

0

0

0

1.3

A without A1

Individuals (%)

0

0

0

0

0

0

0

0

33.3

0

42.4

0.3

  1. The sample size for each geographic region is given in parentheses. aNumbers refer to the proportion of individuals that are grouped into this haplogroup in each region. bNumber of haplotypes in each region. The values in parentheses refer to the number of unique haplotypes in that region. We only counted number of haplotypes and unique haplotypes for the three main haplogroups (D1a1a, D1a2, and D1b) that had a large sample size. cIndividuals in this column refer to feral pigs. dAncient DNAs. e Ancient DNAs and feral pigs are not included.