From: Exogean: a framework for annotating protein-coding genes in eukaryotic genomic DNA
Class of diagnostic | Number of cases | Description of the cause |
---|---|---|
1 | 33 | Proteins matching multiple neighboring genes in clusters |
2 | 8 | GENCODE CDS size below 300 nucleotides |
3 | 3 | GENCODE CDS interrupted by the boundaries of the Encode region |
4 | 2 | Insufficient evidence to predict the gene |
5 | 3 | Protein evidence eliminated by Exogean |
6 | 1 | mRNA evidence eliminated by Exogean |
7 | 2 | Intron donor/acceptor sites not accepted by Exogean |
8 | 1 | mRNA evidence was misaligned with genomic DNA |