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Table 2 Probe targets and effects of sex and sex by probe interaction for several components of the sex determination pathway

From: Sex-specific expression of alternative transcripts in Drosophila

Genes

Probes

Transcripts

Ratio (female/male)*

Sex effect†

Sex-by-probe

  

Non-sex specific

Male

Female

   

tra (CG16724)

9,174

-

-

-RA

1.10

<0.0001

NA

tra2 (CG10128)

4,734

-RA -RB -RD -RF -RG

-RC -RE

-

1.19

<0.0001

0.43

 

11,136

-RA -RB -RF -RG

-RC

-

1.13

<0.0001

 
 

15,655

-RA -RB -RD -RF -RG

-RC -RE

-

1.11

<0.0001

 
 

19,044

-RA -RB -RD -RF -RG

-RC -RE

-

1.13

<0.0001

 

Sxl (CG33070)

782

-RA -RC -RE -RG

-RB -RF -RK

-RD -RH -RJ

1.13

<0.0001

< 0.0001

 

824

-RG

-RB

 

0.98

0.55

 
 

3,315

-RC

 

-RJ

1.12

<0.0001

 
 

4,972

-RC

 

-RJ

1.03

<0.0001

 
 

20,747

-RA -RC -RE -RG

-RB -RF -RK

-RD -RH -RJ

1.14

<0.0001

 

dsx (CG11094)

6,162

-

-

-RB

1.25

<0.0001

0.0006

 

12,495

-

-RA

-RB

1.06

0.22

 
 

12,690

-

-RA

-

0.95

0.20

 
 

13,818

-

-RA

-RB

0.99

0.93

 

her (CG4694)

4,988

-RA

-

-

1.12

<0.0001

NA

fru (CG14307)

1,388

-RI -RJ -RL -RM

-RE

-RC

0.98

0.77

0.01

 

2,271

-RI -RJ -RL -RM

-RE

-RC

0.94

0.05

 
 

9,294

-RB -RF

-

-

0.96

0.16

 
 

11,005

-RI -RJ -RL -RM

-RE

-RC

0.86

<0.0001

 
 

15,704

-

-RB -RE -RG

-RC -RF -RH

1.02

0.15

 
 

17,247

-

-RB

-RF

0.96

0.003

 
 

17,741

-RA -RD -RI -RJ -RK -RL -RM

-RB -RE -RG

-RC -RF -RH

1.03

0.071

 

Yp1 (CG2985)

13,974

-

-

-RA

1.37

<0.0001

NA

Yp2 (CG2979)

13,101

-

-

-RA

1.68

<0.0001

NA

Yp3 (CG11129)

2,812

-

-

-RA

1.57

<0.0001

NA

  1. A sex by probe interaction occurs when the relative amount of the two (or more) probes differs between males and females. Thus, if only one probe was present, then the sex by probe effect is not applicable (NA). *Ratios were estimated for each probe from the natural log of the background corrected signal. †Individual probes were tested for difference between the males and females (sex effect) according to the single transcript model.