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Table 1 Diagnostic peptides

From: Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics

ORF identification statistics

 
 

Number

   All peptide matches above hyperscore 35

105,065

   + spectra match only a single peptide

66,711

   + peptide maps to a unique location in the genome

38,906

   ORFs with confidence > 95%*

427

Peptide classification

 

   Intra-exonic perfect match (PM)

1,682

   Intra-exonic different reading frame (IE)

47

   Overlapping exon (OE)

90

   Non-exonic (NE)

490

  1. Peptides are categorized based upon where they align to in relation to the annotated start/stop boundaries of genes.*Based on Poisson statistic with correction for multiple hypothesis testing
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Genome Biology

ISSN: 1474-760X

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