From: Mutation patterns of amino acid tandem repeats in the human proteome
Repeat type | Number of repeats with EST coverage* | Average codon homogeneity | Average number of ESTs | Polymorphic repeats (%) | Polymorphic up-down (%)† | Gap/total repeat variants (%)‡ |
---|---|---|---|---|---|---|
All | 2,227 | 0.49 | 27.4 | 115 (5.2) | 110-106 (4.8) | 60/137 (44%) |
A | 249 | 0.37 | 35.5 | 14 (5.6) | 16-9 (5) | 8/17 (47%) |
E | 487 | 0.55 | 28.8 | 31 (6.4) | 20-20 (4.1) | 15/35 (43%) |
G | 193 | 0.48 | 27.7 | 12 (6.2) | 13-12 (6.5) | 4/15 (26%) |
L | 210 | 0.55 | 26.8 | 5 (2.4) | 11-13 (5.7) | 4/5 (80%) |
P | 312 | 0.41 | 26.8 | 17 (5.4) | 17-17 (5.4) | 3/22 (14%) |
S | 315 | 0.41 | 22.7 | 9 (2.9) | 10-8 (2.8) | 2/11 (18%) |
K | 134 | 0.5 | 36.9 | 7 (5.2) | 6-10(5.9) | 3/7 (43%) |
Q | 137 | 0.66 | 19.7 | 14 (10.2) | 8-9 (6.2) | 15/17 (88%) |