Table 4 Observed and expected densities of SSRs in different genic regions
From: Distinct patterns of SSR distribution in the Arabidopsis thalianaand rice genomes
| Â | 5'-UTR | Exon | Intron | 3'-UTR |
|---|---|---|---|---|
Arabidopsis | Â | Â | Â | Â |
Mononucleotide | 434.6 (12.3) | 3.3 (4.8) | 321.6 (65.7) | 33.9 (3.2) |
Dinucleotide | 664.2 (20.4) | 7.3 (12.9) | 122.7 (33.9) | 12.3 (3.1) |
Trinucleotide | 702.7 (7.7) | 218.7 (4.5) | 90.9 (17.6) | 17.1 (1.4) |
Tetranucleotide | 105.8 (27.7) | 3.3 (17.9) | 58.7 (58.9) | 8.7 (4.5) |
Rice | Â | Â | Â | Â |
Mononucleotide | 248.1 (6.1) | 4.2 (3.7) | 132.9 (4.9) | 222.8 (11.5) |
Dinucleotide | 500.6 (13.2) | 16.1 (11.5) | 70.9 (12.8) | 88.5 (16.9) |
Trinucleotide | 1670.6 (4.5) | 421.4 (3.9) | 182.3 (4.4) | 153.2 (6.5) |
Tetranucleotide | 337.4 (18.7) | 7.6 (16.1) | 46.2 (17.7) | 121.6 (24.3) |