From: Predicting domain-domain interactions using a parsimony approach
Domain A | Domain B | Pfam A | Pfam B | LP-score | pw-score | GS | Diff | DPEA |
---|---|---|---|---|---|---|---|---|
IL8 | 7tm_1 | PF00048 | PF00001 | 1 | 0.0000 | Â | Â | Yes |
LSM | LSM | PF01423 | PF01423 | 1 | 0.0000 | Yes | Â | Yes |
Pkinase | Pkinase | PF00069 | PF00069 | 1 | 0.0000 | Yes | Â | Â |
Proteasome | Proteasome | PF00227 | PF00227 | 1 | 0.0000 | Yes | Â | Yes |
RRM_1 | RRM_1 | PF00076 | PF00076 | 1 | 0.0000 | Yes | Â | Yes |
zf-C2H2 | zf-C2H2 | PF00096 | PF00096 | 1 | 0.0000 | Yes | Â | Yes |
WD40 | Cpn60_TCP1 | PF00400 | PF00118 | 1 | 0.0002 | Â | Â | Yes |
Pkinase | Cyclin_N | PF00069 | PF00134 | 1 | 0.0004 | Yes | Â | Yes |
zf-C3HC4 | UQ_con | PF00097 | PF00179 | 1 | 0.0004 | Yes | Â | Yes |
RRM_1 | LSM | PF00076 | PF01423 | 1 | 0.0019 | Â | Â | Yes |
Chitin_bind_4 | Chitin_bind_4 | PF00379 | PF00379 | 1 | 0.0039 | Â | Â | Yes |
TNFR_c6 | TNF | PF00020 | PF00229 | 1 | 0.0010 | Yes | Yes | Â |
PCI | PCI | PF01399 | PF01399 | 0.999 | 0.0010 | Â | Yes | Â |
Ras | Hrf1 | PF00071 | PF03878 | 0.999 | 0.0050 | Â | Â | Yes |
HATPase_c | HATPase_c | PF02518 | PF02518 | 0.998 | 0.0050 | Yes | Yes | Â |
GTP_CDC | GTP_CDC | PF00735 | PF00735 | 0.998 | 0.0010 | Â | Â | Yes |
Pfam-B_1 | Nnf1 | PB000001 | PF03980 | 0.997 | 0.0070 | Â | Â | Yes |
Prefoldin | KE2 | PF02996 | PF01920 | 0.997 | 0.0100 | Yes | Â | Yes |
C1-set | C1-set | PF07654 | PF07654 | 0.996 | 0.0020 | Yes | Yes | Â |
Ferritin | Ferritin | PF00210 | PF00210 | 0.996 | 0.0039 | Yes | Â | Yes |
SH3_1 | Pfam-B_18104 | PF00018 | PB018104 | 0.995 | 0.0010 | Â | Â | Yes |
Adap_comp_sub | Adaptin_N | PF00928 | PF01602 | 0.994 | 0.0010 | Yes | Â | Yes |
Globin | Globin | PF00042 | PF00042 | 0.991 | 0.0040 | Yes | Â | Yes |
BTB | BTB | PF00651 | PF00651 | 0.99 | 0.0090 | Yes | Yes | Â |
WD40 | Nrap | PF00400 | PF03813 | 0.987 | 0.0090 | Â | Â | Yes |
EMP24_GP25L | EMP24_GP25L | PF01105 | PF01105 | 0.986 | 0.0030 | Yes | Â | Yes |
Pribosyltran | Pribosyltran | PF00156 | PF00156 | 0.984 | 0.0030 | Yes | Â | Yes |
Prenyltrans | PPTA | PF00432 | PF01239 | 0.984 | 0.0020 | Yes | Â | Yes |
Synaptobrevin | SNARE | PF00957 | PF05739 | 0.982 | 0.0010 | Yes | Yes | Â |
V-SNARE | SNARE | PF05008 | PF05739 | 0.976 | 0.0050 | Yes | Yes | Â |
bZIP | bZIP | PF00170 | PF00170 | 0.976 | 0.0070 | Yes | Â | Â |
Clat_adaptor_s | Adaptin_N | PF01217 | PF01602 | 0.974 | 0.0030 | Yes | Â | Yes |
Hexapep | Hexapep | PF00132 | PF00132 | 0.973 | 0.0060 | Yes | Â | Yes |
Autotransporter | Autotransporter | PF03797 | PF03797 | 0.97 | 0.0000 | Â | Â | Yes |
CK_II_beta | CK_II_beta | PF01214 | PF01214 | 0.968 | 0.0020 | Yes | Â | Yes |
MCM | MCM | PF00493 | PF00493 | 0.953 | 0.0000 | Â | Yes | Â |
zf-U1 | LSM | PF06220 | PF01423 | 0.948 | 0.0080 | Â | Â | Yes |
Ribonuc_red_sm | Ribonuc_red_sm | PF00268 | PF00268 | 0.944 | 0.0010 | Yes | Â | Yes |
SNARE | SNARE | PF05739 | PF05739 | 0.943 | 0.0000 | Yes | Yes | Â |
CBFD_NFYB_HMF | CBFD_NFYB_HMF | PF00808 | PF00808 | 0.942 | 0.0040 | Yes | Â | Yes |
SNARE | Sec1 | PF05739 | PF00995 | 0.941 | 0.0020 | Yes | Yes | Â |
ubiquitin | UBA | PF00240 | PF00627 | 0.94 | 0.0090 | Â | Yes | Â |
IF-2B | IF-2B | PF01008 | PF01008 | 0.94 | 0.0060 | Yes | Â | Yes |
KH_1 | KH_1 | PF00013 | PF00013 | 0.94 | 0.0090 | Yes | Yes | Â |
Chorion_3 | CBM_14 | PF05387 | PF01607 | 0.939 | 0.0050 | Â | Â | Yes |
SH3_1 | Pfam-B_62907 | PF00018 | PB062907 | 0.936 | 0.0010 | Â | Yes | Â |
Clat_adaptor_s | Adap_comp_sub | PF01217 | PF00928 | 0.935 | 0.0030 | Yes | Â | Yes |
Bac_DNA_binding | Bac_DNA_binding | PF00216 | PF00216 | 0.933 | 0.0010 | Yes | Â | Yes |
Cyclin_N | CKS | PF00134 | PF01111 | 0.933 | 0.0090 | Â | Yes | Â |