Figure 1
From: Refinement and prediction of protein prenylation motifs
Sequence logos [74] and physicochemical property profiles of FT and GGT1 substrates. Selected physical properties (hydrophilicity = KRIW790102; flexibility = KARP850103, size = CHOC760101; aliphatic = ZVEL_ALI_1; see Tables 1 and 2 for details) are calculated as average over the nonredundant learning sets of FT and GGT1. The plotted lines correspond to the relative deviation of the respective properties from an average calculated over carboxy termini from the UniRef50 database [22].